Those 1.9 Peugot TD Samurais are very rare though. I think they only sold them for a handful of years, maybe 98-2001 to the best of my knowledge, and those TD Samurais didn't exactly sell well. I would give Axis Eng (or whoever is selling the kit now) a call and tell them what you have, and what you want to do and see what they say about the gearing.
If you really want a 3.40 r&p, I would get on a European Suzuki BBS and see if anyone has a set to sell. However, I think that the 1.6NA VW engine doesn't have the low end grunt, nor the top end needed for this gear set. The 3.40 gearset was for a 1.9 turbo diesel engine that churned out 89 ft-lbs of torque out at 2,000rpm and 63hp at 4,500rpm Nearly 20-ft lb and 12hp more than the 1.6NA VW diesel.
I would also like to point out that the 1.9 Peugot TD still put out less torque than the 1.6 8-valve Suzuki gas engine which put out 93 ft-lbs at 3,000rpm.
The 1.6 8-valve actualy has a lot of low end grunt all the way from idle to the 3,000 torque peak. I have a 1600cc 8-valve in a tintop Samurai that has a 4:1 t-case gearset, 215/75 tires, but is stock otherwise. It's one super torquey and quick Samurai!